Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CUX2O14529 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CUX2O14529 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CUX2O14529 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
CUX2O14529 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC25.96■■□□□ 1.75
CUX2O14529 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CUX2O14529 AL354861.1-201ENST00000445213 355 ntBASIC25.96■■□□□ 1.75
CUX2O14529 CCNC-217ENST00000523985 958 ntTSL 2 BASIC25.96■■□□□ 1.75
CUX2O14529 EMC4-208ENST00000559078 599 ntTSL 3 BASIC25.96■■□□□ 1.75
CUX2O14529 AC093752.3-201ENST00000567343 901 ntBASIC25.96■■□□□ 1.75
CUX2O14529 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CUX2O14529 AC138466.3-201ENST00000619983 221 ntBASIC25.96■■□□□ 1.75
CUX2O14529 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CUX2O14529 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
CUX2O14529 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC25.96■■□□□ 1.75
CUX2O14529 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC25.96■■□□□ 1.75
CUX2O14529 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
CUX2O14529 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
CUX2O14529 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CUX2O14529 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC25.95■■□□□ 1.74
CUX2O14529 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
CUX2O14529 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC25.95■■□□□ 1.74
CUX2O14529 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
CUX2O14529 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CUX2O14529 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
CUX2O14529 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CUX2O14529 LSM5-207ENST00000410044 687 ntTSL 3 BASIC25.95■■□□□ 1.74
CUX2O14529 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC25.95■■□□□ 1.74
CUX2O14529 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CUX2O14529 CHCHD2P2-201ENST00000503744 321 ntBASIC25.95■■□□□ 1.74
CUX2O14529 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC25.95■■□□□ 1.74
CUX2O14529 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC25.95■■□□□ 1.74
CUX2O14529 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC25.95■■□□□ 1.74
CUX2O14529 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC25.95■■□□□ 1.74
CUX2O14529 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC25.95■■□□□ 1.74
CUX2O14529 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
CUX2O14529 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
CUX2O14529 AC011471.3-201ENST00000623576 402 ntBASIC25.95■■□□□ 1.74
CUX2O14529 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC25.95■■□□□ 1.74
CUX2O14529 LINC01815-202ENST00000641468 1409 ntBASIC25.95■■□□□ 1.74
CUX2O14529 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC25.95■■□□□ 1.74
CUX2O14529 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC25.95■■□□□ 1.74
CUX2O14529 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CUX2O14529 AC020931.1-201ENST00000589622 1346 ntBASIC25.94■■□□□ 1.74
CUX2O14529 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CUX2O14529 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC25.94■■□□□ 1.74
CUX2O14529 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC25.94■■□□□ 1.74
CUX2O14529 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CUX2O14529 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CUX2O14529 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC25.94■■□□□ 1.74
CUX2O14529 AC010900.1-201ENST00000449849 1296 ntBASIC25.94■■□□□ 1.74
CUX2O14529 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC25.94■■□□□ 1.74
CUX2O14529 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC25.94■■□□□ 1.74
CUX2O14529 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC25.94■■□□□ 1.74
CUX2O14529 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC25.94■■□□□ 1.74
CUX2O14529 AP005212.2-201ENST00000584979 510 ntBASIC25.94■■□□□ 1.74
CUX2O14529 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CUX2O14529 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CUX2O14529 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC25.94■■□□□ 1.74
CUX2O14529 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CUX2O14529 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CUX2O14529 AC092171.3-201ENST00000610122 2651 ntBASIC25.94■■□□□ 1.74
CUX2O14529 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CUX2O14529 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CUX2O14529 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC25.93■■□□□ 1.74
CUX2O14529 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC25.93■■□□□ 1.74
CUX2O14529 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC25.93■■□□□ 1.74
CUX2O14529 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 RBM38-204ENST00000371219 760 ntTSL 2 BASIC25.93■■□□□ 1.74
CUX2O14529 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 RBM4-207ENST00000506523 654 ntTSL 3 BASIC25.93■■□□□ 1.74
CUX2O14529 AC106047.2-201ENST00000511723 743 ntBASIC25.93■■□□□ 1.74
CUX2O14529 RN7SL470P-201ENST00000583069 259 ntBASIC25.93■■□□□ 1.74
CUX2O14529 AL157813.1-201ENST00000612996 587 ntBASIC25.93■■□□□ 1.74
CUX2O14529 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
CUX2O14529 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC25.93■■□□□ 1.74
CUX2O14529 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 FRMPD2B-201ENST00000431305 1347 ntBASIC25.93■■□□□ 1.74
CUX2O14529 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC25.93■■□□□ 1.74
CUX2O14529 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CUX2O14529 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC25.93■■□□□ 1.74
CUX2O14529 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CUX2O14529 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CUX2O14529 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CUX2O14529 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
CUX2O14529 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC25.92■■□□□ 1.74
CUX2O14529 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC25.92■■□□□ 1.74
CUX2O14529 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC25.92■■□□□ 1.74
CUX2O14529 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms