Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC28A1O00337 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC28A1O00337 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC28A1O00337 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.05■□□□□ 0
SLC28A1O00337 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
SLC28A1O00337 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.05■□□□□ 0
SLC28A1O00337 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SLC28A1O00337 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SLC28A1O00337 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC28A1O00337 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.05■□□□□ 0
SLC28A1O00337 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.05■□□□□ -0
SLC28A1O00337 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SLC28A1O00337 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
SLC28A1O00337 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.05■□□□□ -0
SLC28A1O00337 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.05■□□□□ -0
SLC28A1O00337 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.05■□□□□ -0
SLC28A1O00337 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.05■□□□□ -0
SLC28A1O00337 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.05■□□□□ -0
SLC28A1O00337 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
SLC28A1O00337 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.05■□□□□ -0
SLC28A1O00337 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 CICP23-201ENST00000605013 2741 ntBASIC15.05■□□□□ -0
SLC28A1O00337 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
SLC28A1O00337 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SLC28A1O00337 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SLC28A1O00337 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SLC28A1O00337 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SLC28A1O00337 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A1O00337 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.04■□□□□ -0
SLC28A1O00337 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.04■□□□□ -0
SLC28A1O00337 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A1O00337 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.04■□□□□ -0
SLC28A1O00337 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A1O00337 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.04■□□□□ -0
SLC28A1O00337 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A1O00337 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 AL671883.3-201ENST00000603274 991 ntBASIC15.04■□□□□ -0
SLC28A1O00337 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.04■□□□□ -0
SLC28A1O00337 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.04■□□□□ -0
SLC28A1O00337 MIR6069-201ENST00000620069 79 ntBASIC15.04■□□□□ -0
SLC28A1O00337 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SLC28A1O00337 AC009093.7-201ENST00000623853 1223 ntBASIC15.04■□□□□ -0
SLC28A1O00337 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC28A1O00337 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.04■□□□□ -0
SLC28A1O00337 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.04■□□□□ -0
SLC28A1O00337 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 LINC00528-201ENST00000600723 2160 ntBASIC15.04■□□□□ -0
SLC28A1O00337 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
SLC28A1O00337 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.04■□□□□ -0
SLC28A1O00337 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms