Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDLIM1O00151 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDLIM1O00151 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
PDLIM1O00151 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.96□□□□□ -0.02
PDLIM1O00151 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.02
PDLIM1O00151 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
PDLIM1O00151 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PDLIM1O00151 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PDLIM1O00151 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PDLIM1O00151 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PDLIM1O00151 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
PDLIM1O00151 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
PDLIM1O00151 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.95□□□□□ -0.02
PDLIM1O00151 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.95□□□□□ -0.02
PDLIM1O00151 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.95□□□□□ -0.02
PDLIM1O00151 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.95□□□□□ -0.02
PDLIM1O00151 ACTL9-202ENST00000612068 1252 ntBASIC14.95□□□□□ -0.02
PDLIM1O00151 AC010507.1-201ENST00000633895 436 ntBASIC14.95□□□□□ -0.02
PDLIM1O00151 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.95□□□□□ -0.02
PDLIM1O00151 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
PDLIM1O00151 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.95□□□□□ -0.02
PDLIM1O00151 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.95□□□□□ -0.02
PDLIM1O00151 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 MYO15B-237ENST00000642007 4893 ntBASIC14.95□□□□□ -0.02
PDLIM1O00151 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.95□□□□□ -0.02
PDLIM1O00151 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.95□□□□□ -0.02
PDLIM1O00151 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
PDLIM1O00151 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
PDLIM1O00151 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PDLIM1O00151 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM1O00151 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 PMS2P7-201ENST00000506558 1336 ntBASIC14.94□□□□□ -0.02
PDLIM1O00151 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM1O00151 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PDLIM1O00151 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 LINC01230-201ENST00000625222 3017 ntBASIC14.94□□□□□ -0.02
PDLIM1O00151 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PDLIM1O00151 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PDLIM1O00151 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM1O00151 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PDLIM1O00151 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM1O00151 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.94□□□□□ -0.02
PDLIM1O00151 CXCL1P1-201ENST00000502804 216 ntBASIC14.94□□□□□ -0.02
PDLIM1O00151 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.94□□□□□ -0.02
PDLIM1O00151 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.94□□□□□ -0.02
PDLIM1O00151 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PDLIM1O00151 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
PDLIM1O00151 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.94□□□□□ -0.02
PDLIM1O00151 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms