Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 FAM21FP-201ENST00000426241 1131 ntBASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 FO681548.1-201ENST00000455617 1132 ntBASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 KRT18P25-201ENST00000508931 1278 ntBASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 AC244669.2-201ENST00000612320 853 ntBASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 AC112504.1-201ENST00000623415 1841 ntBASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TBC1D3FA6NER0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AP000812.2-201ENST00000538934 718 ntBASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AL583810.1-201ENST00000553344 1045 ntBASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 RN7SL219P-201ENST00000582872 296 ntBASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AP005019.2-201ENST00000615104 511 ntBASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 BX539320.1-201ENST00000623759 877 ntBASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TBC1D3FA6NER0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TBC1D3FA6NER0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms