Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 SPDYE17-201ENST00000412399 783 ntBASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 AC139530.3-201ENST00000620344 690 ntBASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 MYO15B-237ENST00000642007 4893 ntBASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 PHKG1P2-201ENST00000457537 863 ntBASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 AC109322.1-201ENST00000524499 1264 ntBASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 AC004449.1-201ENST00000564240 433 ntBASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 AL133215.2-201ENST00000609242 977 ntBASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 CETN4P-206ENST00000642099 2168 ntBASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
HLA-DRB4X5D2U9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 AC104581.4-201ENST00000623126 3052 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 AL359258.3-201ENST00000622910 2331 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 AC023908.3-201ENST00000564211 3047 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms