Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 KRT8P44-201ENST00000441609 1350 ntBASIC15.08■□□□□ 0
AP4B1Q9Y6B7 LINC01230-201ENST00000625222 3017 ntBASIC15.08■□□□□ 0
AP4B1Q9Y6B7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4B1Q9Y6B7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 ELL2P1-201ENST00000413990 1906 ntBASIC15.07■□□□□ 0
AP4B1Q9Y6B7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 AC092474.2-201ENST00000424288 719 ntBASIC15.07■□□□□ 0
AP4B1Q9Y6B7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 ALG1L5P-201ENST00000482043 771 ntBASIC15.07■□□□□ 0
AP4B1Q9Y6B7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 FAM86C2P-203ENST00000528684 1004 ntBASIC15.07■□□□□ 0
AP4B1Q9Y6B7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 AC092902.6-201ENST00000641783 218 ntBASIC15.07■□□□□ 0
AP4B1Q9Y6B7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4B1Q9Y6B7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AC211486.1-202ENST00000416371 468 ntBASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AC211476.1-201ENST00000503899 468 ntBASIC15.06■□□□□ 0
AP4B1Q9Y6B7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 GPALPP1-207ENST00000611650 899 ntBASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AC006538.3-201ENST00000612495 578 ntBASIC15.06■□□□□ 0
AP4B1Q9Y6B7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.06■□□□□ 0
AP4B1Q9Y6B7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms