Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 ARSEP1-201ENST00000420443 635 ntBASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 PHKG1P2-201ENST00000457537 863 ntBASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 RN7SL399P-201ENST00000471648 279 ntBASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 AC106886.1-201ENST00000568660 600 ntBASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 AC017083.2-201ENST00000608069 979 ntBASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TSSC4Q9Y5U2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 AC007326.2-201ENST00000624224 7579 ntBASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 ALOX12P2-203ENST00000570921 1945 ntBASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 RPL13P2-201ENST00000440687 659 ntBASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 TARDBPP1-201ENST00000442013 1203 ntBASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 RPL13AP25-201ENST00000484130 612 ntBASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 AC092552.1-201ENST00000547243 906 ntBASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 AC015936.2-201ENST00000593177 259 ntBASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 AL450472.2-201ENST00000603663 1156 ntBASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 WFDC1-204ENST00000613603 549 ntBASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms