Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF11Q9Y3C5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 AC254562.1-201ENST00000417586 456 ntBASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 CNN2P11-201ENST00000429351 262 ntBASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 AP001059.3-201ENST00000619053 235 ntBASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 AC134684.3-201ENST00000641758 218 ntBASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 AC232323.1-201ENST00000540724 2099 ntBASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 REXO1L5P-201ENST00000622260 2098 ntBASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF11Q9Y3C5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AL035456.1-201ENST00000456064 1369 ntBASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 KRT8P12-202ENST00000472924 1397 ntBASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 FO393414.2-201ENST00000405153 598 ntBASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF11Q9Y3C5 AC027612.4-201ENST00000605371 583 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms