Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP20Q9Y2K6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 AC000095.1-201ENST00000603208 874 ntBASIC17.08■□□□□ 0.32
USP20Q9Y2K6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP20Q9Y2K6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 AC136621.1-201ENST00000624017 2304 ntBASIC17.07■□□□□ 0.32
USP20Q9Y2K6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 U91328.1-201ENST00000437528 223 ntBASIC17.07■□□□□ 0.32
USP20Q9Y2K6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 KRT17P7-201ENST00000451704 1104 ntBASIC17.07■□□□□ 0.32
USP20Q9Y2K6 GIMAP3P-201ENST00000495150 836 ntBASIC17.07■□□□□ 0.32
USP20Q9Y2K6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 MSTO2P-201ENST00000314835 1709 ntBASIC17.07■□□□□ 0.32
USP20Q9Y2K6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP20Q9Y2K6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 AC013268.4-201ENST00000637413 2228 ntBASIC17.06■□□□□ 0.32
USP20Q9Y2K6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.06■□□□□ 0.32
USP20Q9Y2K6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms