Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 RN7SKP230-201ENST00000365642 335 ntBASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 AL157823.1-201ENST00000403727 628 ntBASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 BPIFB5P-201ENST00000457066 1099 ntBASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 AC120498.5-201ENST00000561757 299 ntBASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 AC007250.1-201ENST00000608934 338 ntBASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 NF1P11-201ENST00000621292 1282 ntBASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RIMBP3Q9UFD9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC23.83■■□□□ 1.4
RIMBP3Q9UFD9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 GEMIN8P4-201ENST00000380526 729 ntBASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 CELP-201ENST00000411440 1249 ntTSL 5 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 AC020910.5-201ENST00000623668 1865 ntBASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RIMBP3Q9UFD9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 NQO2-204ENST00000380454 851 ntTSL 2 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 AHCYP3-201ENST00000420053 1279 ntBASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 URB1-AS1-201ENST00000534991 831 ntBASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 TMBIM7P-202ENST00000641474 1516 ntBASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC23.81■■□□□ 1.4
RIMBP3Q9UFD9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 AL356000.1-201ENST00000441073 1238 ntBASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 RN7SL173P-201ENST00000461853 292 ntBASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 OR2A1-AS1-210ENST00000496968 531 ntBASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 AP000769.1-203ENST00000637245 208 ntBASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
RIMBP3Q9UFD9 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 AC092896.1-201ENST00000465850 380 ntBASIC23.79■■□□□ 1.4
RIMBP3Q9UFD9 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms