Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
BLOC1S4Q9NUP1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 AC093004.1-201ENST00000508850 424 ntBASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 AP000845.1-201ENST00000581677 2131 ntBASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 DRD5P1-201ENST00000456605 1438 ntBASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BLOC1S4Q9NUP1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AC236430.1-201ENST00000402231 743 ntBASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AC098850.1-201ENST00000419919 790 ntBASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 HMGN1P19-201ENST00000436976 333 ntBASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AC002472.2-201ENST00000442739 958 ntBASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 FAM207CP-201ENST00000443486 507 ntBASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 RRP7BP-205ENST00000566851 833 ntBASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AC036164.1-201ENST00000570544 333 ntBASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AC099568.2-201ENST00000609194 695 ntBASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AC008761.3-201ENST00000624803 892 ntBASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.27■□□□□ 0.36
BLOC1S4Q9NUP1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
BLOC1S4Q9NUP1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BLOC1S4Q9NUP1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms