Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TLR9Q9NR96 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.46■□□□□ 0.22
TLR9Q9NR96 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TLR9Q9NR96 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.46■□□□□ 0.22
TLR9Q9NR96 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TLR9Q9NR96 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TLR9Q9NR96 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TLR9Q9NR96 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TLR9Q9NR96 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
TLR9Q9NR96 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 AC016629.1-201ENST00000596579 586 ntBASIC16.45■□□□□ 0.22
TLR9Q9NR96 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 U62317.3-201ENST00000608319 855 ntBASIC16.45■□□□□ 0.22
TLR9Q9NR96 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 PCDHA1-201ENST00000378133 2726 ntBASIC16.45■□□□□ 0.22
TLR9Q9NR96 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.45■□□□□ 0.22
TLR9Q9NR96 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TLR9Q9NR96 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 AL662890.1-201ENST00000396818 632 ntBASIC16.44■□□□□ 0.22
TLR9Q9NR96 FXNP2-201ENST00000411625 547 ntBASIC16.44■□□□□ 0.22
TLR9Q9NR96 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 CNN2P10-201ENST00000443067 918 ntBASIC16.44■□□□□ 0.22
TLR9Q9NR96 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.44■□□□□ 0.22
TLR9Q9NR96 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TLR9Q9NR96 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms