Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.3□□□□□ -0.12
HMG20AQ9NP66 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 AC099521.3-201ENST00000624251 2938 ntBASIC14.29□□□□□ -0.12
HMG20AQ9NP66 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 AF228730.7-201ENST00000641842 219 ntBASIC14.29□□□□□ -0.12
HMG20AQ9NP66 AL731571.1-201ENST00000617058 5428 ntBASIC14.29□□□□□ -0.12
HMG20AQ9NP66 TOP3BP1-201ENST00000420768 1380 ntBASIC14.29□□□□□ -0.12
HMG20AQ9NP66 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.29□□□□□ -0.12
HMG20AQ9NP66 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.28□□□□□ -0.12
HMG20AQ9NP66 PTCHD3P3-201ENST00000403073 906 ntBASIC14.28□□□□□ -0.12
HMG20AQ9NP66 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HMG20AQ9NP66 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms