Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 AC007950.2-201ENST00000615045 2347 ntBASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 KRT8P22-201ENST00000562317 1415 ntBASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VAT1LQ9HCJ6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 AL442647.2-201ENST00000429864 857 ntBASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 GIMAP3P-201ENST00000495150 836 ntBASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 CU634019.7-201ENST00000624153 1185 ntBASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 FP236241.2-201ENST00000624906 1185 ntBASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VAT1LQ9HCJ6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VAT1LQ9HCJ6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms