Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 AC136621.1-201ENST00000624017 2304 ntBASIC18.34■□□□□ 0.53
RNF41Q9H4P4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 AC132872.4-202ENST00000622924 2756 ntBASIC18.34■□□□□ 0.53
RNF41Q9H4P4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF41Q9H4P4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF41Q9H4P4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.33■□□□□ 0.52
RNF41Q9H4P4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF41Q9H4P4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 AL162726.2-201ENST00000438986 1017 ntBASIC18.32■□□□□ 0.52
RNF41Q9H4P4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 AC011495.1-201ENST00000498085 584 ntBASIC18.32■□□□□ 0.52
RNF41Q9H4P4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 ENPP7P5-201ENST00000541031 1031 ntBASIC18.32■□□□□ 0.52
RNF41Q9H4P4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF41Q9H4P4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms