Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3FQ9H1D9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.12■□□□□ 0.33
POLR3FQ9H1D9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 CLUHP6-201ENST00000580789 941 ntBASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 AC008735.3-201ENST00000596646 500 ntBASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
POLR3FQ9H1D9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 U91328.1-201ENST00000437528 223 ntBASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 AP001582.1-201ENST00000525856 295 ntBASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 AL138799.1-201ENST00000448213 1675 ntBASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR3FQ9H1D9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 FER1L4-210ENST00000615531 5998 ntBASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 RPL5P21-201ENST00000404620 815 ntBASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 TDH-203ENST00000531764 1110 ntBASIC17.09■□□□□ 0.33
POLR3FQ9H1D9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms