Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 AL162426.1-201ENST00000624141 743 ntBASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC004923.1-202ENST00000642106 209 ntBASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 E2F3P2-201ENST00000447755 1422 ntBASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-1Q9BYQ7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 MTHFR-217ENST00000641820 1569 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC024909.3-201ENST00000611513 2257 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AL136309.1-201ENST00000403917 691 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC007274.2-201ENST00000421675 662 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 GHSR-202ENST00000427970 912 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AL596276.2-201ENST00000447525 331 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC005324.6-201ENST00000587972 613 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC009955.4-201ENST00000597192 544 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC073352.2-201ENST00000609385 439 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 FKBP4P6-201ENST00000457486 1332 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 AC020910.5-201ENST00000623668 1865 ntBASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
KRTAP4-1Q9BYQ7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms