Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 PIN1P1-201ENST00000412108 996 ntBASIC14.11□□□□□ -0.15
USB1Q9BQ65 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 COX20P2-201ENST00000452636 358 ntBASIC14.11□□□□□ -0.15
USB1Q9BQ65 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 RN7SL204P-201ENST00000582831 262 ntBASIC14.11□□□□□ -0.15
USB1Q9BQ65 AC004223.2-201ENST00000590309 544 ntBASIC14.11□□□□□ -0.15
USB1Q9BQ65 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.11□□□□□ -0.15
USB1Q9BQ65 AL359258.3-201ENST00000622910 2331 ntBASIC14.11□□□□□ -0.15
USB1Q9BQ65 AL033527.5-202ENST00000641632 1098 ntBASIC14.11□□□□□ -0.15
USB1Q9BQ65 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.11□□□□□ -0.15
USB1Q9BQ65 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
USB1Q9BQ65 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 MEP1AP4-201ENST00000423244 1087 ntBASIC14.1□□□□□ -0.15
USB1Q9BQ65 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 AC021321.1-201ENST00000607397 1113 ntBASIC14.1□□□□□ -0.15
USB1Q9BQ65 AC048344.4-201ENST00000619744 527 ntBASIC14.1□□□□□ -0.15
USB1Q9BQ65 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.1□□□□□ -0.15
USB1Q9BQ65 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
USB1Q9BQ65 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
USB1Q9BQ65 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AL391825.1-201ENST00000457671 1364 ntBASIC14.09□□□□□ -0.15
USB1Q9BQ65 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
USB1Q9BQ65 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.09□□□□□ -0.15
USB1Q9BQ65 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms