Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 PCDHA1-201ENST00000378133 2726 ntBASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 AL138799.1-201ENST00000448213 1675 ntBASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 GK-202ENST00000378941 458 ntTSL 3 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 NUS1P3-201ENST00000423502 862 ntBASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.15■□□□□ 0.18
CDK5RAP1Q96SZ6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDK5RAP1Q96SZ6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
CDK5RAP1Q96SZ6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDK5RAP1Q96SZ6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.14■□□□□ 0.18
CDK5RAP1Q96SZ6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 OR8S1-201ENST00000310194 1080 ntBASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 BOLA2P3-201ENST00000404566 256 ntBASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 U91328.1-201ENST00000437528 223 ntBASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 BTNL10-201ENST00000595971 695 ntBASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 AC008735.3-201ENST00000596646 500 ntBASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 AC233724.13-201ENST00000598383 410 ntBASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDK5RAP1Q96SZ6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms