Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 AP002414.2-201ENST00000591780 3365 ntBASIC18.47■□□□□ 0.55
NEK1Q96PY6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NEK1Q96PY6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NEK1Q96PY6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 MRPS18AP1-201ENST00000414458 589 ntBASIC18.46■□□□□ 0.55
NEK1Q96PY6 AC135586.1-201ENST00000539323 574 ntBASIC18.46■□□□□ 0.55
NEK1Q96PY6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.46■□□□□ 0.55
NEK1Q96PY6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NEK1Q96PY6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 BASP1P1-201ENST00000430708 665 ntBASIC18.45■□□□□ 0.54
NEK1Q96PY6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 AL589987.1-201ENST00000453380 819 ntBASIC18.45■□□□□ 0.54
NEK1Q96PY6 AL512638.1-201ENST00000457493 794 ntBASIC18.45■□□□□ 0.54
NEK1Q96PY6 AC093214.1-201ENST00000511688 1107 ntBASIC18.45■□□□□ 0.54
NEK1Q96PY6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 SRD5A3P1-201ENST00000603021 949 ntBASIC18.45■□□□□ 0.54
NEK1Q96PY6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
NEK1Q96PY6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.45■□□□□ 0.54
NEK1Q96PY6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NEK1Q96PY6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 TCAF2P1-201ENST00000291129 2421 ntBASIC18.44■□□□□ 0.54
NEK1Q96PY6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 COX20P2-201ENST00000452636 358 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms