Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 AC107890.1-201ENST00000422478 521 ntBASIC14.82□□□□□ -0.04
COL21A1Q96P44 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 CICP24-201ENST00000605464 2705 ntBASIC14.82□□□□□ -0.04
COL21A1Q96P44 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 AC007292.2-201ENST00000593524 1812 ntBASIC14.82□□□□□ -0.04
COL21A1Q96P44 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
COL21A1Q96P44 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
COL21A1Q96P44 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 AC009090.5-201ENST00000624886 2285 ntBASIC14.81□□□□□ -0.04
COL21A1Q96P44 AL136982.4-201ENST00000437689 1740 ntBASIC14.81□□□□□ -0.04
COL21A1Q96P44 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 AC069120.2-201ENST00000524091 540 ntBASIC14.81□□□□□ -0.04
COL21A1Q96P44 AC140878.1-201ENST00000565277 250 ntBASIC14.81□□□□□ -0.04
COL21A1Q96P44 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 AC106028.4-201ENST00000614509 607 ntBASIC14.81□□□□□ -0.04
COL21A1Q96P44 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 CYP4F24P-201ENST00000586049 1580 ntBASIC14.81□□□□□ -0.04
COL21A1Q96P44 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
COL21A1Q96P44 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.81□□□□□ -0.04
COL21A1Q96P44 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.8□□□□□ -0.04
COL21A1Q96P44 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL21A1Q96P44 CETN4P-206ENST00000642099 2168 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms