Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 AC006504.4-201ENST00000592118 1568 ntBASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 FAM197Y8-203ENST00000450145 560 ntBASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 MIR1199-201ENST00000621445 119 ntBASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 AC097359.2-201ENST00000604992 2389 ntBASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 PTENP1-202ENST00000532280 3996 ntBASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 REXO1L2P-201ENST00000425429 2069 ntBASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 AF186996.4-201ENST00000467186 377 ntBASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 RNPS1P1-201ENST00000507437 918 ntBASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 AP002469.2-201ENST00000531724 424 ntBASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 AL805961.1-202ENST00000641562 540 ntBASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 AC107918.4-202ENST00000641623 219 ntBASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 AC092135.3-201ENST00000624151 1846 ntBASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP6Q96FZ7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 WASH3P-207ENST00000560956 1394 ntBASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 FO538757.1-201ENST00000623083 1397 ntBASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP6Q96FZ7 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms