Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 IGHV3-71-201ENST00000523324 359 ntBASIC14.19□□□□□ -0.14
LRRC46Q96FV0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.19□□□□□ -0.14
LRRC46Q96FV0 AC099568.2-201ENST00000609194 695 ntBASIC14.19□□□□□ -0.14
LRRC46Q96FV0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRRC46Q96FV0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 AC008494.3-201ENST00000606615 944 ntBASIC14.18□□□□□ -0.14
LRRC46Q96FV0 AC074044.1-201ENST00000609673 707 ntBASIC14.18□□□□□ -0.14
LRRC46Q96FV0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 AL031731.1-201ENST00000642131 2094 ntBASIC14.18□□□□□ -0.14
LRRC46Q96FV0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LRRC46Q96FV0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 DGCR5-201ENST00000399539 862 ntBASIC14.17□□□□□ -0.14
LRRC46Q96FV0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 INE1-201ENST00000456273 945 ntBASIC14.17□□□□□ -0.14
LRRC46Q96FV0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 AC093726.1-201ENST00000608064 963 ntBASIC14.17□□□□□ -0.14
LRRC46Q96FV0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.17□□□□□ -0.14
LRRC46Q96FV0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms