Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.13■□□□□ 0.01
RNF31Q96EP0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF31Q96EP0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF31Q96EP0 MIR4259-201ENST00000584466 101 ntBASIC15.13■□□□□ 0.01
RNF31Q96EP0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF31Q96EP0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF31Q96EP0 AL359881.2-201ENST00000602973 570 ntBASIC15.13■□□□□ 0.01
RNF31Q96EP0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.13■□□□□ 0.01
RNF31Q96EP0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF31Q96EP0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF31Q96EP0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF31Q96EP0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF31Q96EP0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF31Q96EP0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF31Q96EP0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF31Q96EP0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF31Q96EP0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF31Q96EP0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RNF31Q96EP0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF31Q96EP0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF31Q96EP0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 AL391825.1-201ENST00000457671 1364 ntBASIC15.12■□□□□ 0.01
RNF31Q96EP0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 PRAL-201ENST00000624952 3286 ntBASIC15.12■□□□□ 0.01
RNF31Q96EP0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 TARDBPP1-201ENST00000442013 1203 ntBASIC15.12■□□□□ 0.01
RNF31Q96EP0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 SNX29P1-201ENST00000548357 1007 ntBASIC15.12■□□□□ 0.01
RNF31Q96EP0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 AC093726.1-201ENST00000608064 963 ntBASIC15.12■□□□□ 0.01
RNF31Q96EP0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RNF31Q96EP0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF31Q96EP0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 POU5F1P6-201ENST00000466990 990 ntBASIC15.11■□□□□ 0.01
RNF31Q96EP0 AC011495.1-201ENST00000498085 584 ntBASIC15.11■□□□□ 0.01
RNF31Q96EP0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 RAB43P1-201ENST00000561790 589 ntBASIC15.11■□□□□ 0.01
RNF31Q96EP0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF31Q96EP0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF31Q96EP0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms