Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ATG4AQ8WYN0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATG4AQ8WYN0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ATG4AQ8WYN0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATG4AQ8WYN0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
ATG4AQ8WYN0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATG4AQ8WYN0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATG4AQ8WYN0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 RBPMS2P1-201ENST00000437762 623 ntBASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 FLJ16779-201ENST00000612722 7638 ntBASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ATG4AQ8WYN0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATG4AQ8WYN0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ATG4AQ8WYN0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATG4AQ8WYN0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.21■□□□□ 0.18
ATG4AQ8WYN0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATG4AQ8WYN0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.21■□□□□ 0.18
ATG4AQ8WYN0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ATG4AQ8WYN0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 TARDBPP1-201ENST00000442013 1203 ntBASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 SPDYE14P-201ENST00000442619 822 ntBASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 AC139749.1-202ENST00000617529 3139 ntBASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
ATG4AQ8WYN0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms