Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RNF138Q8WVD3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 AC063926.2-201ENST00000623766 1308 ntBASIC13.95□□□□□ -0.18
RNF138Q8WVD3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 MST1L-201ENST00000442552 2185 ntBASIC13.95□□□□□ -0.18
RNF138Q8WVD3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.95□□□□□ -0.18
RNF138Q8WVD3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 EIF3FP3-201ENST00000434851 1086 ntBASIC13.95□□□□□ -0.18
RNF138Q8WVD3 U91328.1-201ENST00000437528 223 ntBASIC13.95□□□□□ -0.18
RNF138Q8WVD3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 SLC25A47P1-201ENST00000531577 414 ntBASIC13.95□□□□□ -0.18
RNF138Q8WVD3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 BTNL10-201ENST00000595971 695 ntBASIC13.95□□□□□ -0.18
RNF138Q8WVD3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.95□□□□□ -0.18
RNF138Q8WVD3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 AL138709.1-201ENST00000614840 1693 ntBASIC13.95□□□□□ -0.18
RNF138Q8WVD3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF138Q8WVD3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 KRT8P35-201ENST00000483942 1338 ntBASIC13.94□□□□□ -0.18
RNF138Q8WVD3 AC134312.5-201ENST00000568031 1313 ntBASIC13.94□□□□□ -0.18
RNF138Q8WVD3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.94□□□□□ -0.18
RNF138Q8WVD3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 REXO1L2P-201ENST00000425429 2069 ntBASIC13.94□□□□□ -0.18
RNF138Q8WVD3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RNF138Q8WVD3 AC079776.1-201ENST00000401540 1152 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms