Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 AC087481.3-201ENST00000602886 1894 ntBASIC13.7□□□□□ -0.22
CPEB3Q8NE35 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AC073347.1-201ENST00000421633 2643 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 BTBD7P1-201ENST00000447253 1453 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 NORAD-201ENST00000565493 5339 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 FAM8A3P-201ENST00000427218 844 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AC114501.2-201ENST00000439631 535 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 INGX-202ENST00000489074 768 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 SLED1-202ENST00000512051 380 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AC004840.1-201ENST00000636359 365 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 AC092384.3-202ENST00000564646 2873 ntBASIC13.69□□□□□ -0.22
CPEB3Q8NE35 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPEB3Q8NE35 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 AC023824.1-201ENST00000562945 2975 ntBASIC13.68□□□□□ -0.22
CPEB3Q8NE35 PPT1-215ENST00000641471 2368 ntBASIC13.68□□□□□ -0.22
CPEB3Q8NE35 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 AC015922.1-201ENST00000421102 1152 ntBASIC13.68□□□□□ -0.22
CPEB3Q8NE35 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.68□□□□□ -0.22
CPEB3Q8NE35 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms