Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 AC106028.4-201ENST00000614509 607 ntBASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 AL109936.8-201ENST00000641772 604 ntBASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 AL596257.1-201ENST00000641463 2694 ntBASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AL161772.1-201ENST00000610494 4412 ntBASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 KRT18P64-201ENST00000434946 1219 ntBASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AC060766.1-201ENST00000590824 627 ntBASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AC093512.1-201ENST00000617969 520 ntBASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
CCDC116Q8IYX3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC116Q8IYX3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms