Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 CU639417.3-201ENST00000624240 1404 ntBASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 AC112693.3-201ENST00000624819 1983 ntBASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 SOCS2P1-201ENST00000417727 557 ntBASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 NME2P1-201ENST00000426182 414 ntBASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 AL033527.5-201ENST00000641382 801 ntBASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf40Q8IXQ3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 KRT8P22-201ENST00000562317 1415 ntBASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 C18orf15-201ENST00000623680 2534 ntBASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 AL162726.2-201ENST00000438986 1017 ntBASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 INE1-201ENST00000456273 945 ntBASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 AC103702.1-201ENST00000548801 2630 ntBASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf40Q8IXQ3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
C9orf40Q8IXQ3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.33□□□□□ -0.11
C9orf40Q8IXQ3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
C9orf40Q8IXQ3 PPT1-215ENST00000641471 2368 ntBASIC14.33□□□□□ -0.11
C9orf40Q8IXQ3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
C9orf40Q8IXQ3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C9orf40Q8IXQ3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms