Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 AC015818.8-201ENST00000587907 1519 ntBASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 AC004945.1-201ENST00000416738 983 ntBASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 RN7SL48P-201ENST00000579283 293 ntBASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 AC025181.2-201ENST00000606994 802 ntBASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPAS3Q8IXF0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 AC114812.1-204ENST00000449669 728 ntBASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 AC104982.3-201ENST00000581995 514 ntBASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 AC148477.4-201ENST00000613430 1793 ntBASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 AL596087.1-201ENST00000400979 1969 ntBASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPAS3Q8IXF0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPAS3Q8IXF0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms