Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 HCG4-201ENST00000418983 998 ntBASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 AC092647.4-201ENST00000457211 535 ntBASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 AC011498.5-201ENST00000592027 486 ntBASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 AC097359.2-201ENST00000604992 2389 ntBASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 AC023024.2-201ENST00000623561 1993 ntBASIC14.22□□□□□ -0.13
CROCCP3Q8IVE0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 ARMC10P1-201ENST00000313754 855 ntBASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 AC004945.1-201ENST00000416738 983 ntBASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 AL137013.1-201ENST00000432946 1228 ntBASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 MINOS1P3-201ENST00000457048 203 ntBASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CROCCP3Q8IVE0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms