Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 LINC00528-201ENST00000600723 2160 ntBASIC14.47□□□□□ -0.09
VRK2Q86Y07 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 AC084364.1-201ENST00000551967 1556 ntBASIC14.47□□□□□ -0.09
VRK2Q86Y07 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.46□□□□□ -0.09
VRK2Q86Y07 RPL37AP1-201ENST00000412502 279 ntBASIC14.46□□□□□ -0.09
VRK2Q86Y07 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 DNAJB3-202ENST00000449667 1266 ntBASIC14.46□□□□□ -0.09
VRK2Q86Y07 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 MIR6069-201ENST00000620069 79 ntBASIC14.46□□□□□ -0.09
VRK2Q86Y07 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VRK2Q86Y07 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
VRK2Q86Y07 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.46□□□□□ -0.1
VRK2Q86Y07 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
VRK2Q86Y07 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VRK2Q86Y07 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VRK2Q86Y07 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VRK2Q86Y07 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VRK2Q86Y07 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
VRK2Q86Y07 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
VRK2Q86Y07 CICP11-201ENST00000434745 2827 ntBASIC14.46□□□□□ -0.1
VRK2Q86Y07 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VRK2Q86Y07 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VRK2Q86Y07 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VRK2Q86Y07 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 KRT18P64-201ENST00000434946 1219 ntBASIC14.45□□□□□ -0.1
VRK2Q86Y07 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 HLA-J-203ENST00000494367 1087 ntBASIC14.45□□□□□ -0.1
VRK2Q86Y07 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms