Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 AC016694.1-201ENST00000434179 700 ntBASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 KRT90P-201ENST00000549264 1064 ntBASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
UBE3BQ7Z3V4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 HYMAI-201ENST00000635591 3347 ntBASIC19.33■□□□□ 0.69
UBE3BQ7Z3V4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 TNRC18P3-201ENST00000441896 2691 ntBASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
UBE3BQ7Z3V4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 KRT18P25-201ENST00000508931 1278 ntBASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 AC145423.3-201ENST00000615987 467 ntBASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE3BQ7Z3V4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 KRT8P35-201ENST00000483942 1338 ntBASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 AC008741.2-201ENST00000612792 3115 ntBASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 KLF2P2-201ENST00000416807 1039 ntBASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 HLA-V-201ENST00000429037 534 ntBASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 CSF2RBP1-201ENST00000447905 391 ntBASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms