Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 TSPY22P-201ENST00000427496 604 ntBASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 AC104076.2-201ENST00000448912 469 ntBASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 BX276092.5-203ENST00000456199 560 ntBASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 AC073592.5-201ENST00000624854 528 ntBASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 AL353732.1-201ENST00000569618 1459 ntBASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 AL356585.2-201ENST00000625078 2396 ntBASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 AC023024.2-201ENST00000623561 1993 ntBASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP4Q6PIL6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 KRT18P38-201ENST00000449496 1282 ntBASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 DGCR9-201ENST00000609630 2415 ntBASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.17□□□□□ -0.46
KCNIP4Q6PIL6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP4Q6PIL6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.16□□□□□ -0.46
KCNIP4Q6PIL6 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP4Q6PIL6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP4Q6PIL6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.16□□□□□ -0.46
KCNIP4Q6PIL6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP4Q6PIL6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms