Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 GK-202ENST00000378941 458 ntTSL 3 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 AL162726.2-201ENST00000438986 1017 ntBASIC18.5■□□□□ 0.55
CTR9Q6PD62 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.5■□□□□ 0.55
CTR9Q6PD62 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTR9Q6PD62 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 SOCS2P1-201ENST00000417727 557 ntBASIC18.49■□□□□ 0.55
CTR9Q6PD62 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 ENPP7P5-201ENST00000541031 1031 ntBASIC18.49■□□□□ 0.55
CTR9Q6PD62 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 CLUHP6-201ENST00000580789 941 ntBASIC18.49■□□□□ 0.55
CTR9Q6PD62 AC008735.3-201ENST00000596646 500 ntBASIC18.49■□□□□ 0.55
CTR9Q6PD62 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.49■□□□□ 0.55
CTR9Q6PD62 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTR9Q6PD62 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 AC022188.1-201ENST00000620960 1664 ntBASIC18.48■□□□□ 0.55
CTR9Q6PD62 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 AC079776.1-201ENST00000401540 1152 ntBASIC18.48■□□□□ 0.55
CTR9Q6PD62 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 ACTG1P3-201ENST00000431775 1114 ntBASIC18.48■□□□□ 0.55
CTR9Q6PD62 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 AC025181.2-201ENST00000606994 802 ntBASIC18.48■□□□□ 0.55
CTR9Q6PD62 AC107373.2-201ENST00000607735 490 ntBASIC18.48■□□□□ 0.55
CTR9Q6PD62 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CTR9Q6PD62 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTR9Q6PD62 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms