Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 AP005019.2-201ENST00000615104 511 ntBASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 AC079328.2-201ENST00000561241 3354 ntBASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 LINC02447-202ENST00000501888 2146 ntBASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC62Q6P9F0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 AL355994.2-201ENST00000447882 704 ntBASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 RHOXF1P1-202ENST00000635473 501 ntBASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 AC112504.1-201ENST00000623415 1841 ntBASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC62Q6P9F0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 AC025279.2-201ENST00000569730 653 ntBASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 MIR4525-201ENST00000580000 75 ntBASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 MIR6869-201ENST00000619434 62 ntBASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 FLJ16779-201ENST00000612722 7638 ntBASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 AC006449.5-201ENST00000610658 2098 ntBASIC17.48■□□□□ 0.39
CCDC62Q6P9F0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms