Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MIR943-201ENST00000401286 94 ntBASIC18.67■□□□□ 0.58
RNF20Q5VTR2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.67■□□□□ 0.58
RNF20Q5VTR2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.67■□□□□ 0.58
RNF20Q5VTR2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 AC015910.1-201ENST00000579400 975 ntBASIC18.67■□□□□ 0.58
RNF20Q5VTR2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 AL109936.8-201ENST00000641772 604 ntBASIC18.67■□□□□ 0.58
RNF20Q5VTR2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 AC148477.4-201ENST00000613430 1793 ntBASIC18.67■□□□□ 0.58
RNF20Q5VTR2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF20Q5VTR2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 AC100757.3-201ENST00000622361 1406 ntBASIC18.66■□□□□ 0.58
RNF20Q5VTR2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 PCDHA3-202ENST00000532566 4594 ntBASIC18.66■□□□□ 0.58
RNF20Q5VTR2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 AL590560.3-201ENST00000623350 461 ntBASIC18.66■□□□□ 0.58
RNF20Q5VTR2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF20Q5VTR2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.65■□□□□ 0.58
RNF20Q5VTR2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 AC241585.1-201ENST00000433527 519 ntBASIC18.65■□□□□ 0.58
RNF20Q5VTR2 KRT18P64-201ENST00000434946 1219 ntBASIC18.65■□□□□ 0.58
RNF20Q5VTR2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 IGHV3-42-201ENST00000520410 361 ntBASIC18.65■□□□□ 0.58
RNF20Q5VTR2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 LINC01115-203ENST00000606068 577 ntBASIC18.65■□□□□ 0.58
RNF20Q5VTR2 AL844908.2-201ENST00000609461 460 ntBASIC18.65■□□□□ 0.58
RNF20Q5VTR2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 AF228730.6-201ENST00000641497 218 ntBASIC18.65■□□□□ 0.58
RNF20Q5VTR2 AC084121.3-201ENST00000641716 218 ntBASIC18.65■□□□□ 0.58
RNF20Q5VTR2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF20Q5VTR2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms