Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 AC022494.1-201ENST00000466044 728 ntBASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 AL033527.5-201ENST00000641382 801 ntBASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 AC020658.6-201ENST00000623564 1870 ntBASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 CLK3P2-201ENST00000427566 1453 ntBASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC144BQ3MJ40 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 MIR4259-201ENST00000584466 101 ntBASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 AC023908.3-201ENST00000564211 3047 ntBASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC144BQ3MJ40 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 AC106881.1-201ENST00000605849 3329 ntBASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 AC008735.3-201ENST00000596646 500 ntBASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC144BQ3MJ40 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 AC138035.3-201ENST00000622706 2791 ntBASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC144BQ3MJ40 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms