Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTRA3P83110 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTRA3P83110 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HTRA3P83110 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTRA3P83110 LINC01165-201ENST00000445190 1623 ntBASIC17.64■□□□□ 0.41
HTRA3P83110 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTRA3P83110 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTRA3P83110 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTRA3P83110 AC022188.1-201ENST00000620960 1664 ntBASIC17.64■□□□□ 0.41
HTRA3P83110 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTRA3P83110 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTRA3P83110 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HTRA3P83110 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.64■□□□□ 0.41
HTRA3P83110 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HTRA3P83110 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.63■□□□□ 0.41
HTRA3P83110 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HTRA3P83110 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 PTGER4P2-201ENST00000328411 252 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HTRA3P83110 HLA-DMA-203ENST00000395305 777 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.63■□□□□ 0.41
HTRA3P83110 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HTRA3P83110 RPSAP15-201ENST00000448168 861 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 AC053503.3-201ENST00000448375 114 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 RHOQP2-201ENST00000449922 579 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 PTGER4P3-201ENST00000458150 252 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HTRA3P83110 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.63■□□□□ 0.41
HTRA3P83110 MIR4313-201ENST00000580760 101 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 AC004466.2-201ENST00000614749 516 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HTRA3P83110 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HTRA3P83110 AC009560.1-201ENST00000620208 434 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.63■□□□□ 0.41
HTRA3P83110 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HTRA3P83110 WASH7P-201ENST00000488147 1351 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.63■□□□□ 0.41
HTRA3P83110 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.63■□□□□ 0.41
HTRA3P83110 AC067852.2-201ENST00000590513 2313 ntBASIC17.63■□□□□ 0.41
HTRA3P83110 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HTRA3P83110 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.62■□□□□ 0.41
HTRA3P83110 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.62■□□□□ 0.41
HTRA3P83110 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HTRA3P83110 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.62■□□□□ 0.41
HTRA3P83110 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.62■□□□□ 0.41
HTRA3P83110 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HTRA3P83110 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.62■□□□□ 0.41
HTRA3P83110 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC17.62■□□□□ 0.41
HTRA3P83110 BANF1P3-201ENST00000412556 261 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 FAM58BP-201ENST00000439056 645 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 AC012441.2-201ENST00000444843 739 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC17.62■□□□□ 0.41
HTRA3P83110 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.62■□□□□ 0.41
HTRA3P83110 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.62■□□□□ 0.41
HTRA3P83110 AC026470.1-201ENST00000478038 846 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 AC023906.1-201ENST00000486386 453 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 CHCHD2P2-201ENST00000503744 321 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.62■□□□□ 0.41
HTRA3P83110 AP005264.6-204ENST00000588436 719 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.62■□□□□ 0.41
HTRA3P83110 AC011462.4-201ENST00000616866 449 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.62■□□□□ 0.41
HTRA3P83110 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.62■□□□□ 0.41
HTRA3P83110 AP000593.2-201ENST00000542775 1433 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HTRA3P83110 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.62■□□□□ 0.41
HTRA3P83110 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 AL672207.1-201ENST00000328462 1570 ntBASIC17.62■□□□□ 0.41
HTRA3P83110 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HTRA3P83110 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HTRA3P83110 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.61■□□□□ 0.41
HTRA3P83110 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HTRA3P83110 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HTRA3P83110 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HTRA3P83110 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTRA3P83110 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HTRA3P83110 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HTRA3P83110 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms