Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.31■□□□□ 0.2
HTRA4P83105 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HTRA4P83105 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
HTRA4P83105 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.31■□□□□ 0.2
HTRA4P83105 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.31■□□□□ 0.2
HTRA4P83105 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HTRA4P83105 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 AC069218.1-201ENST00000435269 762 ntBASIC16.31■□□□□ 0.2
HTRA4P83105 AC006335.1-201ENST00000445200 547 ntBASIC16.31■□□□□ 0.2
HTRA4P83105 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.31■□□□□ 0.2
HTRA4P83105 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.31■□□□□ 0.2
HTRA4P83105 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.31■□□□□ 0.2
HTRA4P83105 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.31■□□□□ 0.2
HTRA4P83105 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.31■□□□□ 0.2
HTRA4P83105 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.31■□□□□ 0.2
HTRA4P83105 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.31■□□□□ 0.2
HTRA4P83105 AL353770.1-201ENST00000614915 403 ntBASIC16.31■□□□□ 0.2
HTRA4P83105 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
HTRA4P83105 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HTRA4P83105 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.3■□□□□ 0.2
HTRA4P83105 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.3■□□□□ 0.2
HTRA4P83105 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 GHSR-202ENST00000427970 912 ntBASIC16.3■□□□□ 0.2
HTRA4P83105 HLA-K-203ENST00000430151 1046 ntBASIC16.3■□□□□ 0.2
HTRA4P83105 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 AC125604.1-201ENST00000496255 707 ntBASIC16.3■□□□□ 0.2
HTRA4P83105 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.3■□□□□ 0.2
HTRA4P83105 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 AL358472.3-201ENST00000608147 415 ntBASIC16.3■□□□□ 0.2
HTRA4P83105 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.3■□□□□ 0.2
HTRA4P83105 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.3■□□□□ 0.2
HTRA4P83105 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.3■□□□□ 0.2
HTRA4P83105 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HTRA4P83105 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HTRA4P83105 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.3■□□□□ 0.2
HTRA4P83105 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HTRA4P83105 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.29■□□□□ 0.2
HTRA4P83105 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HTRA4P83105 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HTRA4P83105 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.29■□□□□ 0.2
HTRA4P83105 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HTRA4P83105 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HTRA4P83105 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTRA4P83105 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms