Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ABCA4P78363 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 ACKR1-201ENST00000368121 1240 ntBASIC13.41□□□□□ -0.26
ABCA4P78363 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ABCA4P78363 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.41□□□□□ -0.26
ABCA4P78363 RN7SL769P-201ENST00000469386 295 ntBASIC13.41□□□□□ -0.26
ABCA4P78363 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 AC138627.1-207ENST00000641560 1006 ntBASIC13.41□□□□□ -0.26
ABCA4P78363 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.41□□□□□ -0.26
ABCA4P78363 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ABCA4P78363 HINT2P1-201ENST00000419438 481 ntBASIC13.41□□□□□ -0.26
ABCA4P78363 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 AKR7A2P1-201ENST00000460134 915 ntBASIC13.41□□□□□ -0.26
ABCA4P78363 AC091804.1-201ENST00000486888 567 ntBASIC13.41□□□□□ -0.26
ABCA4P78363 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 AC009486.1-201ENST00000569860 813 ntBASIC13.41□□□□□ -0.26
ABCA4P78363 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.41□□□□□ -0.26
ABCA4P78363 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCA4P78363 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ABCA4P78363 AC006449.6-201ENST00000612330 2296 ntBASIC13.41□□□□□ -0.26
ABCA4P78363 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCA4P78363 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 MTX1P1-201ENST00000440904 838 ntBASIC13.4□□□□□ -0.26
ABCA4P78363 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.4□□□□□ -0.26
ABCA4P78363 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.4□□□□□ -0.26
ABCA4P78363 AP001258.2-201ENST00000529891 490 ntBASIC13.4□□□□□ -0.26
ABCA4P78363 AC078819.1-201ENST00000547454 765 ntBASIC13.4□□□□□ -0.26
ABCA4P78363 AC012085.1-201ENST00000548270 765 ntBASIC13.4□□□□□ -0.26
ABCA4P78363 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCA4P78363 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
ABCA4P78363 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCA4P78363 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms