Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.66■□□□□ 0.1
AP1S1P61966 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 AC068587.6-202ENST00000641839 5619 ntBASIC15.66■□□□□ 0.1
AP1S1P61966 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 AC007326.2-201ENST00000624224 7579 ntBASIC15.66■□□□□ 0.1
AP1S1P61966 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.66■□□□□ 0.1
AP1S1P61966 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.66■□□□□ 0.1
AP1S1P61966 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AP1S1P61966 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.66■□□□□ 0.1
AP1S1P61966 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.66■□□□□ 0.1
AP1S1P61966 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 C1QBPP1-201ENST00000400117 770 ntBASIC15.66■□□□□ 0.1
AP1S1P61966 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.66■□□□□ 0.1
AP1S1P61966 SOCS2P1-201ENST00000417727 557 ntBASIC15.66■□□□□ 0.1
AP1S1P61966 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
AP1S1P61966 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.66■□□□□ 0.1
AP1S1P61966 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
AP1S1P61966 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
AP1S1P61966 WFDC1-204ENST00000613603 549 ntBASIC15.66■□□□□ 0.1
AP1S1P61966 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
AP1S1P61966 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.66■□□□□ 0.1
AP1S1P61966 AC105233.6-201ENST00000642093 218 ntBASIC15.66■□□□□ 0.1
AP1S1P61966 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.66■□□□□ 0.1
AP1S1P61966 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
AP1S1P61966 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.66■□□□□ 0.1
AP1S1P61966 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
AP1S1P61966 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.66■□□□□ 0.1
AP1S1P61966 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
AP1S1P61966 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.66■□□□□ 0.1
AP1S1P61966 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AP1S1P61966 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.66■□□□□ 0.1
AP1S1P61966 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.65■□□□□ 0.1
AP1S1P61966 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.65■□□□□ 0.1
AP1S1P61966 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.65■□□□□ 0.1
AP1S1P61966 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
AP1S1P61966 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.65■□□□□ 0.1
AP1S1P61966 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.65■□□□□ 0.1
AP1S1P61966 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.65■□□□□ 0.1
AP1S1P61966 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.65■□□□□ 0.1
AP1S1P61966 AL162726.2-201ENST00000438986 1017 ntBASIC15.65■□□□□ 0.1
AP1S1P61966 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.65■□□□□ 0.1
AP1S1P61966 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.65■□□□□ 0.1
AP1S1P61966 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.65■□□□□ 0.1
AP1S1P61966 AP005018.1-201ENST00000525475 301 ntBASIC15.65■□□□□ 0.1
AP1S1P61966 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.65■□□□□ 0.1
AP1S1P61966 AL359711.2-201ENST00000563105 872 ntBASIC15.65■□□□□ 0.1
AP1S1P61966 AL596325.1-201ENST00000563991 1082 ntBASIC15.65■□□□□ 0.1
AP1S1P61966 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.65■□□□□ 0.1
AP1S1P61966 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.65■□□□□ 0.1
AP1S1P61966 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.65■□□□□ 0.1
AP1S1P61966 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.65■□□□□ 0.1
AP1S1P61966 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP1S1P61966 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms