Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.44■□□□□ 0.06
SRP54P61011 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.44■□□□□ 0.06
SRP54P61011 MIR4313-201ENST00000580760 101 ntBASIC15.44■□□□□ 0.06
SRP54P61011 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.44■□□□□ 0.06
SRP54P61011 AC008735.3-201ENST00000596646 500 ntBASIC15.44■□□□□ 0.06
SRP54P61011 AC017083.2-201ENST00000608069 979 ntBASIC15.44■□□□□ 0.06
SRP54P61011 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
SRP54P61011 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.44■□□□□ 0.06
SRP54P61011 INTS4P2-202ENST00000614726 2019 ntBASIC15.44■□□□□ 0.06
SRP54P61011 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SRP54P61011 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SRP54P61011 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SRP54P61011 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SRP54P61011 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
SRP54P61011 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.43■□□□□ 0.06
SRP54P61011 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SRP54P61011 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.43■□□□□ 0.06
SRP54P61011 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.43■□□□□ 0.06
SRP54P61011 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SRP54P61011 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SRP54P61011 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.43■□□□□ 0.06
SRP54P61011 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 SOCS2P1-201ENST00000417727 557 ntBASIC15.43■□□□□ 0.06
SRP54P61011 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.43■□□□□ 0.06
SRP54P61011 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.43■□□□□ 0.06
SRP54P61011 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.43■□□□□ 0.06
SRP54P61011 VDAC1P7-201ENST00000462417 847 ntBASIC15.43■□□□□ 0.06
SRP54P61011 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.43■□□□□ 0.06
SRP54P61011 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.43■□□□□ 0.06
SRP54P61011 AC000095.1-201ENST00000603208 874 ntBASIC15.43■□□□□ 0.06
SRP54P61011 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.43■□□□□ 0.06
SRP54P61011 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.43■□□□□ 0.06
SRP54P61011 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.43■□□□□ 0.06
SRP54P61011 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.43■□□□□ 0.06
SRP54P61011 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SRP54P61011 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.43■□□□□ 0.06
SRP54P61011 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.43■□□□□ 0.06
SRP54P61011 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.43■□□□□ 0.06
SRP54P61011 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.43■□□□□ 0.06
SRP54P61011 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SRP54P61011 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
SRP54P61011 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.42■□□□□ 0.06
SRP54P61011 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.42■□□□□ 0.06
SRP54P61011 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.42■□□□□ 0.06
SRP54P61011 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.42■□□□□ 0.06
SRP54P61011 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.42■□□□□ 0.06
SRP54P61011 ENPP7P5-201ENST00000541031 1031 ntBASIC15.42■□□□□ 0.06
SRP54P61011 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.42■□□□□ 0.06
SRP54P61011 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 RPSAP52-203ENST00000622976 1023 ntBASIC15.42■□□□□ 0.06
SRP54P61011 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.42■□□□□ 0.06
SRP54P61011 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.42■□□□□ 0.06
SRP54P61011 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.42■□□□□ 0.06
SRP54P61011 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.42■□□□□ 0.06
SRP54P61011 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SRP54P61011 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms