Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CLDN6P56747 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CLDN6P56747 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN6P56747 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.95□□□□□ -0.02
CLDN6P56747 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN6P56747 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 AC015910.1-201ENST00000579400 975 ntBASIC14.95□□□□□ -0.02
CLDN6P56747 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDN6P56747 AC106872.11-201ENST00000605838 421 ntBASIC14.95□□□□□ -0.02
CLDN6P56747 AL451050.2-201ENST00000606967 682 ntBASIC14.95□□□□□ -0.02
CLDN6P56747 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN6P56747 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CLDN6P56747 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDN6P56747 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN6P56747 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN6P56747 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN6P56747 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CLDN6P56747 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CLDN6P56747 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN6P56747 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN6P56747 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN6P56747 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 ACKR1-201ENST00000368121 1240 ntBASIC14.94□□□□□ -0.02
CLDN6P56747 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.94□□□□□ -0.02
CLDN6P56747 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN6P56747 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.94□□□□□ -0.02
CLDN6P56747 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.94□□□□□ -0.02
CLDN6P56747 U62317.3-201ENST00000608319 855 ntBASIC14.94□□□□□ -0.02
CLDN6P56747 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN6P56747 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLDN6P56747 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN6P56747 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN6P56747 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN6P56747 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CLDN6P56747 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 KRT8P35-201ENST00000483942 1338 ntBASIC14.93□□□□□ -0.02
CLDN6P56747 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CLDN6P56747 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CLDN6P56747 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CLDN6P56747 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN6P56747 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN6P56747 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN6P56747 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN6P56747 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
CLDN6P56747 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN6P56747 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN6P56747 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN6P56747 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN6P56747 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN6P56747 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN6P56747 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.93□□□□□ -0.02
CLDN6P56747 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.93□□□□□ -0.02
CLDN6P56747 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN6P56747 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms