Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.01□□□□□ -0.01
EPHA4P54764 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 AC134312.5-201ENST00000568031 1313 ntBASIC15.01□□□□□ -0.01
EPHA4P54764 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
EPHA4P54764 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.01□□□□□ -0.01
EPHA4P54764 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.01□□□□□ -0.01
EPHA4P54764 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.01□□□□□ -0.01
EPHA4P54764 AC093433.1-201ENST00000458048 571 ntBASIC15.01□□□□□ -0.01
EPHA4P54764 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC15.01□□□□□ -0.01
EPHA4P54764 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
EPHA4P54764 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.01□□□□□ -0.01
EPHA4P54764 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.01□□□□□ -0.01
EPHA4P54764 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.01□□□□□ -0.01
EPHA4P54764 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.01□□□□□ -0.01
EPHA4P54764 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
EPHA4P54764 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.01□□□□□ -0.01
EPHA4P54764 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.01□□□□□ -0.01
EPHA4P54764 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
EPHA4P54764 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15□□□□□ -0.01
EPHA4P54764 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15□□□□□ -0.01
EPHA4P54764 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
EPHA4P54764 AC099063.4-201ENST00000641099 1602 ntBASIC15□□□□□ -0.01
EPHA4P54764 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15□□□□□ -0.01
EPHA4P54764 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15□□□□□ -0.01
EPHA4P54764 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15□□□□□ -0.01
EPHA4P54764 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15□□□□□ -0.01
EPHA4P54764 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
EPHA4P54764 BCRP2-202ENST00000447763 634 ntBASIC15□□□□□ -0.01
EPHA4P54764 KLF2P4-201ENST00000451959 1225 ntBASIC15□□□□□ -0.01
EPHA4P54764 AC119751.2-201ENST00000504529 210 ntBASIC15□□□□□ -0.01
EPHA4P54764 BCRP6-201ENST00000510112 632 ntBASIC15□□□□□ -0.01
EPHA4P54764 BCRP7-201ENST00000511549 544 ntBASIC15□□□□□ -0.01
EPHA4P54764 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15□□□□□ -0.01
EPHA4P54764 AL603832.2-201ENST00000566195 2125 ntBASIC15□□□□□ -0.01
EPHA4P54764 RN7SL602P-201ENST00000578326 324 ntBASIC15□□□□□ -0.01
EPHA4P54764 MIR6775-201ENST00000617557 69 ntBASIC15□□□□□ -0.01
EPHA4P54764 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15□□□□□ -0.01
EPHA4P54764 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 PDIA3P1-201ENST00000471856 1510 ntBASIC15□□□□□ -0.01
EPHA4P54764 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15□□□□□ -0.01
EPHA4P54764 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15□□□□□ -0.01
EPHA4P54764 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
EPHA4P54764 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
EPHA4P54764 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
EPHA4P54764 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15□□□□□ -0.01
EPHA4P54764 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15□□□□□ -0.01
EPHA4P54764 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
EPHA4P54764 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.99□□□□□ -0.01
EPHA4P54764 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms