Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 AC136604.1-201ENST00000418535 575 ntBASIC15.76■□□□□ 0.11
LIMK2P53671 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.76■□□□□ 0.11
LIMK2P53671 MTND6P24-201ENST00000440466 518 ntBASIC15.76■□□□□ 0.11
LIMK2P53671 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
LIMK2P53671 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.76■□□□□ 0.11
LIMK2P53671 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.76■□□□□ 0.11
LIMK2P53671 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.76■□□□□ 0.11
LIMK2P53671 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.76■□□□□ 0.11
LIMK2P53671 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.76■□□□□ 0.11
LIMK2P53671 AC005225.4-201ENST00000557330 545 ntBASIC15.76■□□□□ 0.11
LIMK2P53671 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.76■□□□□ 0.11
LIMK2P53671 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.76■□□□□ 0.11
LIMK2P53671 AC148477.4-201ENST00000613430 1793 ntBASIC15.76■□□□□ 0.11
LIMK2P53671 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.76■□□□□ 0.11
LIMK2P53671 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
LIMK2P53671 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LIMK2P53671 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.76■□□□□ 0.11
LIMK2P53671 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.75■□□□□ 0.11
LIMK2P53671 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LIMK2P53671 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LIMK2P53671 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LIMK2P53671 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.75■□□□□ 0.11
LIMK2P53671 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.75■□□□□ 0.11
LIMK2P53671 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.75■□□□□ 0.11
LIMK2P53671 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LIMK2P53671 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.75■□□□□ 0.11
LIMK2P53671 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.75■□□□□ 0.11
LIMK2P53671 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LIMK2P53671 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.75■□□□□ 0.11
LIMK2P53671 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.75■□□□□ 0.11
LIMK2P53671 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.75■□□□□ 0.11
LIMK2P53671 AC005034.1-201ENST00000426657 489 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 CRB3P1-201ENST00000449338 276 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.75■□□□□ 0.11
LIMK2P53671 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.75■□□□□ 0.11
LIMK2P53671 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.75■□□□□ 0.11
LIMK2P53671 AC105021.1-202ENST00000570572 669 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.75■□□□□ 0.11
LIMK2P53671 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.75■□□□□ 0.11
LIMK2P53671 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.75■□□□□ 0.11
LIMK2P53671 AL589739.1-201ENST00000607720 493 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 AC012645.4-201ENST00000610691 1061 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.75■□□□□ 0.11
LIMK2P53671 TEX28P1-201ENST00000613479 1221 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 TEX28P2-201ENST00000617764 1221 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 AL035252.4-201ENST00000624174 288 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 LINC01101-201ENST00000622953 1884 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.75■□□□□ 0.11
LIMK2P53671 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 AC023024.2-201ENST00000623561 1993 ntBASIC15.75■□□□□ 0.11
LIMK2P53671 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LIMK2P53671 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIMK2P53671 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIMK2P53671 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIMK2P53671 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIMK2P53671 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.74■□□□□ 0.11
LIMK2P53671 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.74■□□□□ 0.11
LIMK2P53671 AC087499.5-201ENST00000452760 1342 ntBASIC15.74■□□□□ 0.11
LIMK2P53671 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIMK2P53671 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LIMK2P53671 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.74■□□□□ 0.11
LIMK2P53671 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms