Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CENPFP49454 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CENPFP49454 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.21■□□□□ 0.34
CENPFP49454 AL139094.1-201ENST00000405549 1188 ntBASIC17.21■□□□□ 0.34
CENPFP49454 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.21■□□□□ 0.34
CENPFP49454 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CENPFP49454 ISCA2P1-201ENST00000425548 448 ntBASIC17.21■□□□□ 0.34
CENPFP49454 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.21■□□□□ 0.34
CENPFP49454 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.21■□□□□ 0.34
CENPFP49454 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CENPFP49454 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.21■□□□□ 0.34
CENPFP49454 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.21■□□□□ 0.34
CENPFP49454 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CENPFP49454 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.2■□□□□ 0.34
CENPFP49454 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.2■□□□□ 0.34
CENPFP49454 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.2■□□□□ 0.34
CENPFP49454 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.2■□□□□ 0.34
CENPFP49454 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 AC009779.1-201ENST00000551138 283 ntBASIC17.2■□□□□ 0.34
CENPFP49454 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.2■□□□□ 0.34
CENPFP49454 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.2■□□□□ 0.34
CENPFP49454 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.2■□□□□ 0.34
CENPFP49454 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.2■□□□□ 0.34
CENPFP49454 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.2■□□□□ 0.34
CENPFP49454 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.2■□□□□ 0.34
CENPFP49454 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.2■□□□□ 0.34
CENPFP49454 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.2■□□□□ 0.34
CENPFP49454 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.2■□□□□ 0.34
CENPFP49454 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CENPFP49454 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.2■□□□□ 0.34
CENPFP49454 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 AC006449.5-201ENST00000610658 2098 ntBASIC17.19■□□□□ 0.34
CENPFP49454 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 EIF3FP3-201ENST00000434851 1086 ntBASIC17.19■□□□□ 0.34
CENPFP49454 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.19■□□□□ 0.34
CENPFP49454 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.19■□□□□ 0.34
CENPFP49454 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.19■□□□□ 0.34
CENPFP49454 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CENPFP49454 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.19■□□□□ 0.34
CENPFP49454 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 AL157791.1-201ENST00000553667 1699 ntBASIC17.19■□□□□ 0.34
CENPFP49454 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.19■□□□□ 0.34
CENPFP49454 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 LRRC59-203ENST00000576448 1531 ntBASIC17.19■□□□□ 0.34
CENPFP49454 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.19■□□□□ 0.34
CENPFP49454 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CENPFP49454 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 OR2K2-202ENST00000374428 1038 ntBASIC17.19■□□□□ 0.34
CENPFP49454 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.19■□□□□ 0.34
CENPFP49454 SCARNA21-201ENST00000517026 139 ntBASIC17.19■□□□□ 0.34
CENPFP49454 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.19■□□□□ 0.34
CENPFP49454 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.19■□□□□ 0.34
CENPFP49454 AL358472.3-201ENST00000608147 415 ntBASIC17.19■□□□□ 0.34
CENPFP49454 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CENPFP49454 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.19■□□□□ 0.34
CENPFP49454 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CENPFP49454 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.19■□□□□ 0.34
CENPFP49454 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.19■□□□□ 0.34
CENPFP49454 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.19■□□□□ 0.34
CENPFP49454 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.19■□□□□ 0.34
CENPFP49454 AC079112.1-201ENST00000454972 939 ntBASIC17.19■□□□□ 0.34
CENPFP49454 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.19■□□□□ 0.34
CENPFP49454 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.19■□□□□ 0.34
CENPFP49454 AC242376.2-201ENST00000619355 883 ntBASIC17.19■□□□□ 0.34
CENPFP49454 MIR6858-201ENST00000620733 67 ntBASIC17.19■□□□□ 0.34
CENPFP49454 AL161773.1-201ENST00000624845 863 ntBASIC17.19■□□□□ 0.34
CENPFP49454 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CENPFP49454 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms