Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.41□□□□□ -0.42
CDC34P49427 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.41□□□□□ -0.42
CDC34P49427 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.41□□□□□ -0.42
CDC34P49427 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.41□□□□□ -0.42
CDC34P49427 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.41□□□□□ -0.42
CDC34P49427 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.41□□□□□ -0.42
CDC34P49427 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CDC34P49427 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 AL589702.1-201ENST00000641229 1509 ntBASIC12.41□□□□□ -0.42
CDC34P49427 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.41□□□□□ -0.42
CDC34P49427 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC34P49427 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC34P49427 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 AC073869.1-201ENST00000415574 2762 ntBASIC12.4□□□□□ -0.42
CDC34P49427 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CDC34P49427 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.4□□□□□ -0.42
CDC34P49427 HMGA1P7-201ENST00000406908 502 ntBASIC12.4□□□□□ -0.42
CDC34P49427 SCARNA2-201ENST00000458748 420 ntBASIC12.4□□□□□ -0.42
CDC34P49427 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.4□□□□□ -0.42
CDC34P49427 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 AC243562.2-201ENST00000561247 970 ntBASIC12.4□□□□□ -0.42
CDC34P49427 MIR4313-201ENST00000580760 101 ntBASIC12.4□□□□□ -0.42
CDC34P49427 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 AL355877.3-201ENST00000622820 899 ntBASIC12.4□□□□□ -0.42
CDC34P49427 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CDC34P49427 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC34P49427 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC34P49427 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.4□□□□□ -0.42
CDC34P49427 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.4□□□□□ -0.43
CDC34P49427 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CDC34P49427 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CDC34P49427 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CDC34P49427 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms