Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC4P35249 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC4P35249 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC4P35249 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC4P35249 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC4P35249 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC4P35249 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.37■□□□□ 0.69
RFC4P35249 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC4P35249 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.37■□□□□ 0.69
RFC4P35249 AC022616.1-201ENST00000518688 554 ntBASIC19.37■□□□□ 0.69
RFC4P35249 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RFC4P35249 PRKXP1-201ENST00000561423 1122 ntBASIC19.37■□□□□ 0.69
RFC4P35249 AC106820.3-201ENST00000561653 397 ntBASIC19.37■□□□□ 0.69
RFC4P35249 AC026740.1-201ENST00000607068 791 ntBASIC19.37■□□□□ 0.69
RFC4P35249 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC4P35249 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RFC4P35249 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RFC4P35249 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC4P35249 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC4P35249 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RFC4P35249 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RFC4P35249 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RFC4P35249 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RFC4P35249 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RFC4P35249 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.36■□□□□ 0.69
RFC4P35249 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 ACTG1P2-201ENST00000415776 1125 ntBASIC19.36■□□□□ 0.69
RFC4P35249 ACTG1P11-201ENST00000425411 1125 ntBASIC19.36■□□□□ 0.69
RFC4P35249 AC012618.1-201ENST00000461223 412 ntBASIC19.36■□□□□ 0.69
RFC4P35249 AC106794.1-201ENST00000506935 792 ntBASIC19.36■□□□□ 0.69
RFC4P35249 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.36■□□□□ 0.69
RFC4P35249 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.36■□□□□ 0.69
RFC4P35249 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RFC4P35249 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.36■□□□□ 0.69
RFC4P35249 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.36■□□□□ 0.69
RFC4P35249 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.36■□□□□ 0.69
RFC4P35249 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RFC4P35249 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 CROCCP1-201ENST00000426910 5675 ntBASIC19.36■□□□□ 0.69
RFC4P35249 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC4P35249 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC4P35249 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RFC4P35249 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.35■□□□□ 0.69
RFC4P35249 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RFC4P35249 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC4P35249 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RFC4P35249 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC4P35249 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.35■□□□□ 0.69
RFC4P35249 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC4P35249 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.35■□□□□ 0.69
RFC4P35249 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RFC4P35249 AC007274.2-201ENST00000421675 662 ntBASIC19.35■□□□□ 0.69
RFC4P35249 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.35■□□□□ 0.69
RFC4P35249 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC4P35249 AL596276.2-201ENST00000447525 331 ntBASIC19.35■□□□□ 0.69
RFC4P35249 RNMTL1P1-201ENST00000454103 560 ntBASIC19.35■□□□□ 0.69
RFC4P35249 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RFC4P35249 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.35■□□□□ 0.69
RFC4P35249 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.35■□□□□ 0.69
RFC4P35249 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
RFC4P35249 AC013355.1-201ENST00000562625 723 ntBASIC19.35■□□□□ 0.69
RFC4P35249 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC4P35249 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.35■□□□□ 0.69
RFC4P35249 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC4P35249 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC4P35249 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.34■□□□□ 0.69
RFC4P35249 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 AC011676.5-201ENST00000624864 2660 ntBASIC19.34■□□□□ 0.69
RFC4P35249 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RFC4P35249 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RFC4P35249 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.34■□□□□ 0.69
RFC4P35249 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms