Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXC8P31273 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 NKAIN1P1-201ENST00000435754 582 ntBASIC16.75■□□□□ 0.27
HOXC8P31273 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.75■□□□□ 0.27
HOXC8P31273 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.75■□□□□ 0.27
HOXC8P31273 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXC8P31273 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HOXC8P31273 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.75■□□□□ 0.27
HOXC8P31273 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXC8P31273 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXC8P31273 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXC8P31273 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.75■□□□□ 0.27
HOXC8P31273 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXC8P31273 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.75■□□□□ 0.27
HOXC8P31273 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HOXC8P31273 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 AP005117.1-202ENST00000581724 1908 ntBASIC16.74■□□□□ 0.27
HOXC8P31273 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
HOXC8P31273 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXC8P31273 MST1L-201ENST00000442552 2185 ntBASIC16.74■□□□□ 0.27
HOXC8P31273 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HOXC8P31273 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HOXC8P31273 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HOXC8P31273 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
HOXC8P31273 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.74■□□□□ 0.27
HOXC8P31273 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.74■□□□□ 0.27
HOXC8P31273 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXC8P31273 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXC8P31273 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.74■□□□□ 0.27
HOXC8P31273 AC044849.1-201ENST00000519737 1188 ntBASIC16.74■□□□□ 0.27
HOXC8P31273 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HOXC8P31273 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.74■□□□□ 0.27
HOXC8P31273 CHMP4BP1-201ENST00000556017 588 ntBASIC16.74■□□□□ 0.27
HOXC8P31273 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXC8P31273 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.74■□□□□ 0.27
HOXC8P31273 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC8P31273 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HOXC8P31273 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.73■□□□□ 0.27
HOXC8P31273 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.73■□□□□ 0.27
HOXC8P31273 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.73■□□□□ 0.27
HOXC8P31273 CICP13-201ENST00000422015 2789 ntBASIC16.73■□□□□ 0.27
HOXC8P31273 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.73■□□□□ 0.27
HOXC8P31273 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.73■□□□□ 0.27
HOXC8P31273 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.73■□□□□ 0.27
HOXC8P31273 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.73■□□□□ 0.27
HOXC8P31273 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.73■□□□□ 0.27
HOXC8P31273 MIR4783-201ENST00000580343 82 ntBASIC16.73■□□□□ 0.27
HOXC8P31273 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.73■□□□□ 0.27
HOXC8P31273 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.73■□□□□ 0.27
HOXC8P31273 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
HOXC8P31273 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.73■□□□□ 0.27
HOXC8P31273 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HOXC8P31273 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HOXC8P31273 AL118508.1-201ENST00000613502 2345 ntBASIC16.73■□□□□ 0.27
HOXC8P31273 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC8P31273 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 AC079328.2-201ENST00000561241 3354 ntBASIC16.72■□□□□ 0.27
HOXC8P31273 AL513523.2-202ENST00000427283 2040 ntBASIC16.72■□□□□ 0.27
HOXC8P31273 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC8P31273 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HOXC8P31273 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC8P31273 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC8P31273 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC8P31273 AL157414.3-201ENST00000624276 1954 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms